Pumpkin and Cream Cheese Muffins with Pecan Streusel

Few things go together as well as pumpkin and cream cheese. Sure there’s peanut butter and jelly, as well as peanut butter and chocolate, but warm and spicy pumpkin baked goods paired with sweet cream cheese is a match made in fall-baking heaven. Add to these muffins a pecan streusel topping and you will be hard-pressed to find a better breakfast treat once the weather starts to cool down. These pumpkin-cream cheese muffins have become one of my very favorite fall breakfast items; they taste like part muffin, part pumpkin cupcake, part coffee cake… all wonderful things in my book!

These muffins use a neat little trick to make sure that there is a nice little pocket of cream cheese in the middle and that it doesn’t float or spread out inside the muffins. The cream cheese filling mixture is prepared, shaped into a log and frozen for a couple of hours. When you’re ready to make the muffins, you put a little bit of batter in the muffin cups, then cut the log into even pieces and add a piece of frozen cream cheese filling, then add the remainder of the batter to the muffin cups.

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These muffins, as far as I’m concerned, are truly perfect. The muffin itself is moist and tender – not too airy, not too dense or dry. The cream cheese filling is as perfect a complement as I could imagine, and the pecan streusel on top is the icing on the cake. The pecans add some crunch and the streusel delivers those amazing crumbs synonymous with muffin tops and crumb cake that I can never get enough of.
I can’t think of a more amazing fall and winter breakfast treat than these muffins. They’re indulgent, cozy, and utterly delicious.


Pumpkin and Cream Cheese Muffins with Pecan Streusel
Ingredients
For the Cream Cheese Filling:
- 4 ounces (113.4 g) cream cheese, softened to room temperature
- ½ cup (60 g) powdered sugar
- 1½ teaspoons (1.5 teaspoons) vanilla extract
For the Streusel:
- ½ cup (62.5 g) all-purpose flour
- ⅓ cup (66.67 g) granulated sugar
- ½ teaspoon (0.5 teaspoon) ground cinnamon
- ¼ cup (24.75 g) pecans, roughly chopped
- 3 tablespoons unsalted butter, melted
For the Muffins:
- 1½ cups (187.5 g) all-purpose flour
- 1½ teaspoons (1.5 teaspoons) ground cinnamon
- ¾ teaspoon (0.75 teaspoon) ground nutmeg
- ½ teaspoon (0.5 teaspoon) ground cloves
- ½ teaspoon (0.5 teaspoon) ground ginger
- ¼ teaspoon (0.25 teaspoon) ground allspice
- ½ teaspoon (0.5 teaspoon) baking soda
- ½ teaspoon (0.5 teaspoon) salt
- 1 cup (200 g) granulated sugar
- 1 cup (245 g) canned pumpkin
- 2 eggs
- ½ cup (109 ml) + 2 tablespoons vegetable oil
- ½ teaspoon (0.5 teaspoon) vanilla extract
Instructions
- Make the Cream Cheese Filling In a medium bowl, stir together the cream cheese and confectioners' sugar until smooth. Add the vanilla, and stir to combine. Form the mixture into a 12-inch log on a piece of plastic wrap, wrap it in the plastic wrap and then again in foil, and freeze for at least two hours, or until firm.
- Make the Streusel: In a medium bowl, whisk together the flour, sugar and cinnamon. Stir in the pecans, then use a fork to mix in the melted butter, ensuring that all of the ingredients are moistened. Refrigerate while you prepare the muffins.
- Make the Muffins: Preheat oven to 350 degrees F. Line a standard 12-cup muffin tin with paper liners; set aside.
- In a large bowl, whisk together the flour, cinnamon, nutmeg, cloves, ginger, allspice, baking soda and salt.
- In a medium bowl, whisk together the sugar, pumpkin, eggs, oil, and vanilla extract.
- Pour the pumpkin mixture over the dry ingredients. Use a rubber spatula to gently combine the batter, mixing just until the dry ingredients are moistened.
- Remove the cream cheese from the freezer, and divide it into 12 1-inch slices.
- Scoop 2 to 3 tablespoons of batter into the muffin cups. Place 1 slice of the cream cheese log in the center of each cup, then divide the remaining batter evenly between the muffin cups, ensuring that the cream cheese is completely covered.
- Sprinkle the pecan streusel on top of each muffin. Press on the streusel lightly to make sure it adheres to the batter.
- Bake until golden, about 20 to 25 minutes. Cool in the pan for about 5 minutes, and then remove muffins to a cooling rack to cool completely. Store in an airtight container in the refrigerator for up to 4 days. Let them come to room temperature before serving, or warm briefly in the microwave to take the chill off. The muffins can be wrapped in plastic wrap and frozen for up to 2 months.
Notes
Did you make this recipe?
Leave a review below, then snap a picture and tag @thebrowneyedbaker on Instagram so I can see it!
[Recipe originally published in October 2010]



Isn’t Streusel fun to make and it always adds such a special touch to just about anything!
Ooh… You’ve outdone yourself with these muffins! I will definitely be making them!
I love the frozen cream cheese trick! Thanks!
I cannot wait to make these! Looks so DELICIOUS!
These look wonderful! The creamy center enclosed in pumpkin cake with that yummy looking crispy topping…I bet they were heavenly ;)!
Hi! These look really good!! In Australia, we don’t bake sweets with pumpkin, its used as a vegetable only, so we don’t have canned pumpkin. Can I used a cup of mashed pumpkin instead? Looking forward to trying these asap! Sarah x
Hi Sarah, Yes definitely! Some folks over here prefer to buy whole pumpkins, roast them and then mash them themselves. Definitely can use your own mashed pumpkin. Enjoy!
Without even trying these muffins, I’m in love with them. Oh, Michelle, they sound divine!
I made a banana cream cheese filled muffin just like this and it was fabulous, I can only imagine how great these are! I so have to make these, thanks for sharing!
Amazing! these look amazing! Just printed!
A cream cheese filling that’s baked in. That’s a great idea! I’m so trying these :)
Coincidentally as I am reading this post I am devouring pumpkin cookies topped with cream cheese frosting that I made this morning. Yep, pumpkin and cream cheese, you can’t go wrong! What a smart idea with the cold “log” of cream cheese, very clever. And, that streusel topping looks like it would be good atop so many different things. YUM!
Everywhere I turn around lately I see lots of pumpkin treats, is so hard to decide which one to try (I’d try them all if it wouldn’t be for the extra pounds ).
I love cheesy desserts I’m going to fall in love with these when I try them
Oh my gosh, you’ve got me drooling over here! These are absolutely lovely. I really have to get started on my pumpkin-inspired baking… I’m behind!
I’ve been on a huge pumpkin kick lately. I would love to devour a couple of these muffins right now. Yum!
yum great fall brunch addition!
That frozen cream cheese trick is a really good one – I’m going to use that! My boys are looking over my shoulder right now and, in unison, they both sighed, “Oh, those look good!”
I just made pumpkin muffins, but I will have to make them again and try your recipe:)
Sweet Jesus. That is all. Look at that filling! Torture!
This pumpkin recipe actually made my mouth water (and I don`t really like pumpkin) — they look delicious! Theresa
Definitely a most excellent pairing!! I made something similar many, many years ago when my son was in preschool and had totally forgotten about it. With pumpkin in the fridge just waiting to be used these muffins will be the perfect after school surprise today!
that looks like pure heaven to me. Need some now!!
Wow, these look awesome!! Especially when you cut into them. Perfect fall treat :) :)
I just made Annie’s version last week and they were, without a doubt, the best pumpkin muffins I have ever had! I will definitely be making them again soon.
Recipe sounds delish. Question: is the information on oven temperature and how to assemble the ingredients missing? Only the ingredients are listed. Thanks.
Hi Judy, Oops you were right! I must have done something to accidentally cut that portion, but it is fixed now, the recipe is whole again :)
My favorite thing in a muffin! a filling and a streusel topping! That’s so delicious!
-Amalia
http://buttersweetmelody.wordpress.com
If the pecan streusel wasn’t enough to tempt me to try these, then the cream cheese surprise inside certainly seals the deal!
The cream cheese middle of these muffins looks fantastic! Great recipe :)
wow – these look amazing. Of course I’m a sucker for anything with cream cheese. Add pumpkin to the mix and it’s perfection!
anything with streusel has gotta taste awesome! these look delicious!
I make these only i use roasted pumkin seeds (pepitas) instead of pecans keeps with the pumpkin theme.
I’ve been on a pumpkin run lately, so these look absolutely delicious!
I totally agree it’s the time of the year for pumpkin everything! These delicious muffins have just been added to my list.